Difference between revisions of "TSS:Hg 104107.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ZIP-12= | ||
| + | |all_trans=HGNC:20860 | ||
| + | |bA570F3.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-25 | ||
| + | |end=17951900 | ||
| + | |end_of_center_position=17951893 | ||
|entrez_id=221074 | |entrez_id=221074 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=LZT-Hs8 | + | |gene_alias=LZT-Hs8{{!}}ZIP-12{{!}}bA570F3.1 |
|gene_description=solute carrier family 39 member 12 | |gene_description=solute carrier family 39 member 12 | ||
| − | |gene_name=SLC39A12 | + | |gene_id=221074 |
| + | |gene_name=solute carrier family 39 member 12 | ||
| + | |gene_source=HGNC:20860 | ||
| + | |gene_symbol=SLC39A12 | ||
| + | |gene_synonyms=FLJ30499 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20860 | ||
|nearest_ensembl=ENSG00000148482 | |nearest_ensembl=ENSG00000148482 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001145195 |
|nearest_refseq=NM_152725 | |nearest_refseq=NM_152725 | ||
|nearest_unigene=Hs.350895 | |nearest_unigene=Hs.350895 | ||
| − | |tata_box= | + | |num_trans=221074 |
| + | |species=human | ||
| + | |start=17951885 | ||
| + | |start_of_center_position=17951892 | ||
| + | |strand=+ | ||
| + | |tata_box=78(GGATTTAAAAGG,-,0.00) | ||
| + | |transcript_name=ENST00000377374.8 AK055061 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104107.1 | |tss_id=hg_104107.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q504Y0 | ||
}} | }} | ||
Latest revision as of 19:03, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17951892 |
|---|---|
| End of the center position in the TSS region: | 17951893 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377374.8 AK055061 |
|---|---|
| Distance: | 0 |
| Num_trans: | 221074 |
| All_trans: | HGNC:20860 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_001145195 |
| Entrez ID: | 221074 |
| Nearest Unigene: | Hs.350895 |
| Nearest Refseq: | NM_152725 |
| Nearest Ensembl: | ENSG00000148482 |
| Gene Name: | solute carrier family 39 member 12 |
| Gene Alias: | LZT-Hs8|ZIP-12|bA570F3.1 |
| Gene Description: | solute carrier family 39 member 12 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 78(GGATTTAAAAGG,-,0.00) |
