Difference between revisions of "TSS:Hg 104155.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=160711 |entrez_id=340895 |gc_percent=0.442786 |gene_alias=C10orf112|DIET1|bA265G8.2 |gene_description=MAM and LDL receptor clas...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DIET1= | ||
| + | |bA265G8.2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=160681 | ||
| + | |end=19209486 | ||
| + | |end_of_center_position=19209483 | ||
|entrez_id=340895 | |entrez_id=340895 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=C10orf112 | + | |gene_alias=C10orf112{{!}}DIET1{{!}}bA265G8.2 |
|gene_description=MAM and LDL receptor class A domain containing 1 | |gene_description=MAM and LDL receptor class A domain containing 1 | ||
|gene_name=MALRD1 | |gene_name=MALRD1 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_001142308 | |nearest_refseq=NM_001142308 | ||
|nearest_unigene=Hs.646734 | |nearest_unigene=Hs.646734 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=19209478 | ||
| + | |start_of_center_position=19209482 | ||
| + | |strand=+ | ||
| + | |tata_box=-32(GCTTTTCAAGAC,+,0.00),65(GCATTTATAGGT,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104155.1 | |tss_id=hg_104155.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:43, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19209482 |
|---|---|
| End of the center position in the TSS region: | 19209483 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 160681 |
|---|---|
| Nearest PromoterID: | NM_001142308 |
| Entrez ID: | 340895 |
| Nearest Unigene: | Hs.646734 |
| Nearest Refseq: | NM_001142308 |
| Nearest Ensembl: | ENSG00000204740 |
| Gene Name: | MALRD1 |
| Gene Alias: | C10orf112|DIET1|bA265G8.2 |
| Gene Description: | MAM and LDL receptor class A domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCTTTTCAAGAC,+,0.00),65(GCATTTATAGGT,+,0.00) |
