Difference between revisions of "TSS:Hg 10416.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:27005 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-4 | ||
| + | |end=13514026 | ||
| + | |end_of_center_position=13514008 | ||
|entrez_id=126755 | |entrez_id=126755 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=leucine rich repeat containing 38 | |gene_description=leucine rich repeat containing 38 | ||
| − | |gene_name=LRRC38 | + | |gene_id=126755 |
| + | |gene_name=leucine rich repeat containing 38 | ||
| + | |gene_source=HGNC:27005 | ||
| + | |gene_symbol=LRRC38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:27005 | ||
|nearest_ensembl=ENSG00000162494 | |nearest_ensembl=ENSG00000162494 | ||
|nearest_promoter_id=NM_001010847 | |nearest_promoter_id=NM_001010847 | ||
|nearest_refseq=NM_001010847 | |nearest_refseq=NM_001010847 | ||
|nearest_unigene=Hs.657356 | |nearest_unigene=Hs.657356 | ||
| + | |num_trans=126755 | ||
| + | |species=human | ||
| + | |start=13513988 | ||
| + | |start_of_center_position=13514007 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376085.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10416.1 | |tss_id=hg_10416.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VT99 | ||
}} | }} | ||
Latest revision as of 19:04, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 13514007 |
|---|---|
| End of the center position in the TSS region: | 13514008 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376085.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 126755 |
| All_trans: | HGNC:27005 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001010847 |
| Entrez ID: | 126755 |
| Nearest Unigene: | Hs.657356 |
| Nearest Refseq: | NM_001010847 |
| Nearest Ensembl: | ENSG00000162494 |
| Gene Name: | leucine rich repeat containing 38 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
