Difference between revisions of "TSS:Hg 12223.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000481091.1:29 uc057gho.1:29 ENST00000371884.6:-452 NM_001287347:-452 uc001cqy.3:-452 S53245:-452 |chr=chr1 |cpg_percent=0.085 |distance=29 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |TCL5= |
| + | |all_trans=HGNC:11556 | ||
| + | |bHLHa17= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=460 | |distance_to_tss=460 | ||
|end=47231263 | |end=47231263 | ||
| + | |end_of_center_position=47231255 | ||
|entrez_id=6886 | |entrez_id=6886 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=SCL | + | |gene_alias=SCL{{!}}TCL5{{!}}bHLHa17{{!}}tal-1 |
| − | |gene_description= | + | |gene_description=TAL bHLH transcription factor 1, erythroid differentiation factor |
|gene_id=6886 | |gene_id=6886 | ||
| − | |gene_name= | + | |gene_name=TAL bHLH transcription factor 1, erythroid differentiation factor |
|gene_source=HGNC:11556 | |gene_source=HGNC:11556 | ||
|gene_symbol=TAL1 | |gene_symbol=TAL1 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_003189 | |nearest_refseq=NM_003189 | ||
|nearest_unigene=Hs.705618 | |nearest_unigene=Hs.705618 | ||
| − | |num_trans= | + | |num_trans=6886 |
|species=human | |species=human | ||
|start=47231246 | |start=47231246 | ||
| + | |start_of_center_position=47231254 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000481091 | + | |tal-1= |
| + | |transcript_name=ENST00000481091.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_12223.1 | |tss_id=hg_12223.1 | ||
Latest revision as of 01:37, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47231254 |
|---|---|
| End of the center position in the TSS region: | 47231255 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000481091.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 6886 |
| All_trans: | HGNC:11556 |
TATA-Box annotation
| Distance to TSS: | 460 |
|---|---|
| Nearest PromoterID: | NM_001287347 |
| Entrez ID: | 6886 |
| Nearest Unigene: | Hs.705618 |
| Nearest Refseq: | NM_003189 |
| Nearest Ensembl: | ENSG00000162367 |
| Gene Name: | TAL bHLH transcription factor 1, erythroid differentiation factor |
| Gene Alias: | SCL|TCL5|bHLHa17|tal-1 |
| Gene Description: | TAL bHLH transcription factor 1, erythroid differentiation factor |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
