Difference between revisions of "TSS:Hg 104258.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=23122 |entrez_id=9576 |gc_percent=0.477612 |gene_alias=CT141|Repro-SA-1|pf16 |gene_description=sperm associated antigen 6 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Repro-SA-1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=23071 | ||
| + | |end=22368573 | ||
| + | |end_of_center_position=22368567 | ||
|entrez_id=9576 | |entrez_id=9576 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=CT141 | + | |gene_alias=CT141{{!}}Repro-SA-1{{!}}pf16 |
|gene_description=sperm associated antigen 6 | |gene_description=sperm associated antigen 6 | ||
|gene_name=SPAG6 | |gene_name=SPAG6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000077327 | |nearest_ensembl=ENSG00000077327 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_172242 |
|nearest_refseq=NM_012443 | |nearest_refseq=NM_012443 | ||
|nearest_unigene=Hs.655170 | |nearest_unigene=Hs.655170 | ||
| + | |num_trans=0 | ||
| + | |pf16= | ||
| + | |species=human | ||
| + | |start=22368560 | ||
| + | |start_of_center_position=22368566 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104258.1 | |tss_id=hg_104258.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22368566 |
|---|---|
| End of the center position in the TSS region: | 22368567 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 23071 |
|---|---|
| Nearest PromoterID: | NM_172242 |
| Entrez ID: | 9576 |
| Nearest Unigene: | Hs.655170 |
| Nearest Refseq: | NM_012443 |
| Nearest Ensembl: | ENSG00000077327 |
| Gene Name: | SPAG6 |
| Gene Alias: | CT141|Repro-SA-1|pf16 |
| Gene Description: | sperm associated antigen 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
