Difference between revisions of "TSS:Hg 100230.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=10135 |entrez_id=554202 |gc_percent=0.437811 |gene_alias=hsa-lnc-31 |gene_description=MIR31 host gene |gene_name=MIR31HG |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=10235 | ||
| + | |end=21549571 | ||
| + | |end_of_center_position=21549563 | ||
|entrez_id=554202 | |entrez_id=554202 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=hsa-lnc-31 | + | |gene_alias=LncHIFCAR{{!}}hsa-lnc-31 |
|gene_description=MIR31 host gene | |gene_description=MIR31 host gene | ||
|gene_name=MIR31HG | |gene_name=MIR31HG | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hsa-lnc-31= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_152877 |
|nearest_refseq=NR_027054 | |nearest_refseq=NR_027054 | ||
|nearest_unigene=Hs.458096 | |nearest_unigene=Hs.458096 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=21549554 | ||
| + | |start_of_center_position=21549562 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100230.1 | |tss_id=hg_100230.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21549562 |
|---|---|
| End of the center position in the TSS region: | 21549563 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 10235 |
|---|---|
| Nearest PromoterID: | NR_152877 |
| Entrez ID: | 554202 |
| Nearest Unigene: | Hs.458096 |
| Nearest Refseq: | NR_027054 |
| Nearest Ensembl: | |
| Gene Name: | MIR31HG |
| Gene Alias: | LncHIFCAR|hsa-lnc-31 |
| Gene Description: | MIR31 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
