Difference between revisions of "TSS:Hg 104360.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=30083 |entrez_id=56952 |gc_percent=0.457711 |gene_alias=HHGP |gene_description=phosphoribosyl transferase domain containing 1 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=30045 | ||
| + | |end=24922565 | ||
| + | |end_of_center_position=24922561 | ||
|entrez_id=56952 | |entrez_id=56952 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000099256 | |nearest_ensembl=ENSG00000099256 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282786 |
|nearest_refseq=NM_020200 | |nearest_refseq=NM_020200 | ||
|nearest_unigene=Hs.405619 | |nearest_unigene=Hs.405619 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=24922556 | ||
| + | |start_of_center_position=24922560 | ||
| + | |strand=+ | ||
| + | |tata_box=-35(GGTTTTATAAAG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104360.1 | |tss_id=hg_104360.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24922560 |
|---|---|
| End of the center position in the TSS region: | 24922561 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 30045 |
|---|---|
| Nearest PromoterID: | NM_001282786 |
| Entrez ID: | 56952 |
| Nearest Unigene: | Hs.405619 |
| Nearest Refseq: | NM_020200 |
| Nearest Ensembl: | ENSG00000099256 |
| Gene Name: | PRTFDC1 |
| Gene Alias: | HHGP |
| Gene Description: | phosphoribosyl transferase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GGTTTTATAAAG,-,0.00) |
