Difference between revisions of "TSS:Hg 104392.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:4093 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=186 | |distance_to_tss=186 | ||
| + | |end=26216528 | ||
| + | |end_of_center_position=26216494 | ||
|entrez_id=2572 | |entrez_id=2572 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=GAD65 | |gene_alias=GAD65 | ||
|gene_description=glutamate decarboxylase 2 | |gene_description=glutamate decarboxylase 2 | ||
| − | |gene_name=GAD2 | + | |gene_id=2572 |
| + | |gene_name=glutamate decarboxylase 2 | ||
| + | |gene_source=HGNC:4093 | ||
| + | |gene_symbol=GAD2 | ||
| + | |gene_synonyms=GAD65 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4093 | ||
|nearest_ensembl=ENSG00000136750 | |nearest_ensembl=ENSG00000136750 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000818 |
|nearest_refseq=NM_000818 | |nearest_refseq=NM_000818 | ||
|nearest_unigene=Hs.231829 | |nearest_unigene=Hs.231829 | ||
| − | |tata_box= | + | |num_trans=2572 |
| + | |species=human | ||
| + | |start=26216458 | ||
| + | |start_of_center_position=26216493 | ||
| + | |strand=+ | ||
| + | |tata_box=65(CTCTTTTAAAGC,-,0.00),66(TCTTTTAAAGCT,+,0.00) | ||
| + | |transcript_name=BC047899 BC039038 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104392.1 | |tss_id=hg_104392.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:09, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 26216493 |
|---|---|
| End of the center position in the TSS region: | 26216494 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC047899 BC039038 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2572 |
| All_trans: | HGNC:4093 |
TATA-Box annotation
| Distance to TSS: | 186 |
|---|---|
| Nearest PromoterID: | NM_000818 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 65(CTCTTTTAAAGC,-,0.00),66(TCTTTTAAAGCT,+,0.00) |
