Difference between revisions of "TSS:Hg 104422.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:44917 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
| + | |end=26643177 | ||
| + | |end_of_center_position=26643159 | ||
|entrez_id=731789 | |entrez_id=731789 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=- | + | |gene_alias=LINC00202-2 |
| − | |gene_description= | + | |gene_description=family with sequence similarity 238 member B |
| − | |gene_name= | + | |gene_id=731789 |
| + | |gene_name=family with sequence similarity 238 member B | ||
| + | |gene_source=HGNC:44917 | ||
| + | |gene_symbol=FAM238B | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:44917 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_026794 | |nearest_promoter_id=NR_026794 | ||
|nearest_refseq=NR_026794 | |nearest_refseq=NR_026794 | ||
|nearest_unigene=Hs.178186 | |nearest_unigene=Hs.178186 | ||
| + | |num_trans=731789 | ||
| + | |species=human | ||
| + | |start=26643139 | ||
| + | |start_of_center_position=26643158 | ||
| + | |strand=+ | ||
| + | |transcript_name=CR749234 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104422.1 | |tss_id=hg_104422.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q68DY0 | ||
}} | }} | ||
Latest revision as of 19:09, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 26643158 |
|---|---|
| End of the center position in the TSS region: | 26643159 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CR749234 |
|---|---|
| Distance: | 0 |
| Num_trans: | 731789 |
| All_trans: | HGNC:44917 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NR_026794 |
| Entrez ID: | 731789 |
| Nearest Unigene: | Hs.178186 |
| Nearest Refseq: | NR_026794 |
| Nearest Ensembl: | |
| Gene Name: | family with sequence similarity 238 member B |
| Gene Alias: | LINC00202-2 |
| Gene Description: | family with sequence similarity 238 member B |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
