Difference between revisions of "TSS:Hg 104444.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-96 |entrez_id=10730 |gc_percent=0.497512 |gene_alias=FTSH|MEG4|PAMP|YME1L |gene_description=YME1 like 1 ATPase |gene_name=YME1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MEG4= | ||
| + | |PAMP= | ||
| + | |YME1L= | ||
| + | |all_trans=HGNC:19042 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=297 | ||
|distance_to_tss=-96 | |distance_to_tss=-96 | ||
| + | |end=27154527 | ||
| + | |end_of_center_position=27154517 | ||
|entrez_id=10730 | |entrez_id=10730 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=FTSH | + | |gene_alias=FTSH{{!}}MEG4{{!}}OPA11{{!}}PAMP{{!}}YME1L |
|gene_description=YME1 like 1 ATPase | |gene_description=YME1 like 1 ATPase | ||
| − | |gene_name= | + | |gene_id=84930 |
| + | |gene_name=microtubule associated serine/threonine kinase like | ||
| + | |gene_source=HGNC:19042 | ||
| + | |gene_symbol=MASTL | ||
| + | |gene_synonyms=FLJ14813 Gwl THC2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19042 | ||
|nearest_ensembl=ENSG00000136758 | |nearest_ensembl=ENSG00000136758 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001253866 |
|nearest_refseq=NM_014263 | |nearest_refseq=NM_014263 | ||
|nearest_unigene=Hs.74647 | |nearest_unigene=Hs.74647 | ||
| − | |tata_box= | + | |num_trans=84930 |
| + | |species=human | ||
| + | |start=27154505 | ||
| + | |start_of_center_position=27154516 | ||
| + | |strand=+ | ||
| + | |tata_box=10(TTTTTTAAGGGG,+,0.00) | ||
| + | |transcript_name=ENST00000375946.8 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104444.1 | |tss_id=hg_104444.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96GX5 | ||
}} | }} | ||
Latest revision as of 19:10, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27154516 |
|---|---|
| End of the center position in the TSS region: | 27154517 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375946.8 |
|---|---|
| Distance: | 297 |
| Num_trans: | 84930 |
| All_trans: | HGNC:19042 |
TATA-Box annotation
| Distance to TSS: | -96 |
|---|---|
| Nearest PromoterID: | NM_001253866 |
| Entrez ID: | 10730 |
| Nearest Unigene: | Hs.74647 |
| Nearest Refseq: | NM_014263 |
| Nearest Ensembl: | ENSG00000136758 |
| Gene Name: | microtubule associated serine/threonine kinase like |
| Gene Alias: | FTSH|MEG4|OPA11|PAMP|YME1L |
| Gene Description: | YME1 like 1 ATPase |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 10(TTTTTTAAGGGG,+,0.00) |
