Difference between revisions of "TSS:Hg 104460.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=25380 |entrez_id=22931 |gc_percent=0.402985 |gene_alias=RAB18LI1|WARBM3 |gene_description="RAB18, member RAS oncogene family" |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |WARBM3= | ||
| + | |all_trans=AK090947:433 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=433 |
| + | |distance_to_tss=25250 | ||
| + | |end=27529564 | ||
| + | |end_of_center_position=27529555 | ||
|entrez_id=22931 | |entrez_id=22931 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=RAB18LI1 | + | |gene_alias=RAB18LI1{{!}}WARBM3 |
| − | |gene_description= | + | |gene_description=RAB18, member RAS oncogene family |
|gene_name=RAB18 | |gene_name=RAB18 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000099246 | |nearest_ensembl=ENSG00000099246 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_046172 |
|nearest_refseq=NM_021252 | |nearest_refseq=NM_021252 | ||
|nearest_unigene=Hs.406799 | |nearest_unigene=Hs.406799 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=27529544 | ||
| + | |start_of_center_position=27529554 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK090947 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104460.1 | |tss_id=hg_104460.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:51, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 27529554 |
|---|---|
| End of the center position in the TSS region: | 27529555 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK090947 |
|---|---|
| Distance: | 433 |
| Num_trans: | 1 |
| All_trans: | AK090947:433 |
TATA-Box annotation
| Distance to TSS: | 25250 |
|---|---|
| Nearest PromoterID: | NR_046172 |
| Entrez ID: | 22931 |
| Nearest Unigene: | Hs.406799 |
| Nearest Refseq: | NM_021252 |
| Nearest Ensembl: | ENSG00000099246 |
| Gene Name: | RAB18 |
| Gene Alias: | RAB18LI1|WARBM3 |
| Gene Description: | RAB18, member RAS oncogene family |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
