Difference between revisions of "TSS:Hg 104517.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-146298 |entrez_id=84569 |gc_percent=0.60199 |gene_alias=KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 |gene_description=lysozyme like...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LYC2= | ||
| + | |LYZD1= | ||
| + | |PRO1278= | ||
| + | |bA534G20.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-146307 | ||
| + | |end=29142766 | ||
| + | |end_of_center_position=29142764 | ||
|entrez_id=84569 | |entrez_id=84569 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=KAAG648 | + | |gene_alias=KAAG648{{!}}LYC2{{!}}LYZD1{{!}}PRO1278{{!}}bA534G20.1 |
|gene_description=lysozyme like 1 | |gene_description=lysozyme like 1 | ||
|gene_name=LYZL1 | |gene_name=LYZL1 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_032517 | |nearest_refseq=NM_032517 | ||
|nearest_unigene=Hs.558572 | |nearest_unigene=Hs.558572 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=29142760 | ||
| + | |start_of_center_position=29142763 | ||
| + | |strand=+ | ||
| + | |tata_box=-33(GCCTATAAAAAC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104517.1 | |tss_id=hg_104517.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:52, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29142763 |
|---|---|
| End of the center position in the TSS region: | 29142764 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -146307 |
|---|---|
| Nearest PromoterID: | NM_032517 |
| Entrez ID: | 84569 |
| Nearest Unigene: | Hs.558572 |
| Nearest Refseq: | NM_032517 |
| Nearest Ensembl: | ENSG00000120563 |
| Gene Name: | LYZL1 |
| Gene Alias: | KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 |
| Gene Description: | lysozyme like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCCTATAAAAAC,-,0.00) |
