Difference between revisions of "TSS:Hg 104563.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=95064 |entrez_id=1326 |gc_percent=0.597015 |gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |gene_description=mitogen-activ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |COT= | ||
| + | |EST= | ||
| + | |ESTF= | ||
| + | |MEKK8= | ||
| + | |TPL2= | ||
| + | |Tpl-2= | ||
| + | |all_trans=ENST00000670247.1:-179 | ||
| + | |c-COT= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss= | + | |distance=-179 |
| + | |distance_to_tss=95053 | ||
| + | |end=30529703 | ||
| + | |end_of_center_position=30529700 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=AURA2 | + | |gene_alias=AURA2{{!}}COT{{!}}EST{{!}}ESTF{{!}}MEKK8{{!}}TPL2{{!}}Tpl-2{{!}}c-COT |
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
|gene_name=MAP3K8 | |gene_name=MAP3K8 | ||
| Line 12: | Line 24: | ||
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=30529695 | ||
| + | |start_of_center_position=30529699 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000670247.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104563.1 | |tss_id=hg_104563.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:53, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 30529699 |
|---|---|
| End of the center position in the TSS region: | 30529700 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000670247.1 |
|---|---|
| Distance: | -179 |
| Num_trans: | 1 |
| All_trans: | ENST00000670247.1:-179 |
TATA-Box annotation
| Distance to TSS: | 95053 |
|---|---|
| Nearest PromoterID: | NM_001320961 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | MAP3K8 |
| Gene Alias: | AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
