Difference between revisions of "TSS:Hg 104619.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=LP925043:417 LP925044:428 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=417 |
| − | |entrez_id= | + | |distance_to_tss=-127428 |
| + | |end=31527190 | ||
| + | |end_of_center_position=31527184 | ||
| + | |entrez_id=100505502 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=putative UPF0607 protein FLJ37424 |
| − | |gene_name= | + | |gene_name=LOC100505502 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368169 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001368169 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.730227 |
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=31527176 | ||
| + | |start_of_center_position=31527183 | ||
| + | |strand=+ | ||
| + | |transcript_name=LP925043 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104619.1 | |tss_id=hg_104619.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:54, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 31527183 |
|---|---|
| End of the center position in the TSS region: | 31527184 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LP925043 |
|---|---|
| Distance: | 417 |
| Num_trans: | 2 |
| All_trans: | LP925043:417 LP925044:428 |
TATA-Box annotation
| Distance to TSS: | -127428 |
|---|---|
| Nearest PromoterID: | NM_001368169 |
| Entrez ID: | 100505502 |
| Nearest Unigene: | Hs.730227 |
| Nearest Refseq: | NM_001368169 |
| Nearest Ensembl: | |
| Gene Name: | LOC100505502 |
| Gene Alias: | - |
| Gene Description: | putative UPF0607 protein FLJ37424 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
