Difference between revisions of "TSS:Hg 10463.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-3407 |entrez_id=79814 |gc_percent=0.487562 |gene_alias=- |gene_description=agmatinase |gene_name=AGMAT |gene_type=protein-codin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-3466 | ||
| + | |end=15588520 | ||
| + | |end_of_center_position=15588517 | ||
|entrez_id=79814 | |entrez_id=79814 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_024758 | |nearest_refseq=NM_024758 | ||
|nearest_unigene=Hs.461532 | |nearest_unigene=Hs.461532 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=15588513 | ||
| + | |start_of_center_position=15588516 | ||
| + | |strand=- | ||
| + | |tata_box=-42(GGCCAGATAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_10463.1 | |tss_id=hg_10463.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:55, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15588516 |
|---|---|
| End of the center position in the TSS region: | 15588517 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3466 |
|---|---|
| Nearest PromoterID: | NM_024758 |
| Entrez ID: | 79814 |
| Nearest Unigene: | Hs.461532 |
| Nearest Refseq: | NM_024758 |
| Nearest Ensembl: | ENSG00000116771 |
| Gene Name: | AGMAT |
| Gene Alias: | - |
| Gene Description: | agmatinase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -42(GGCCAGATAAGG,-,0.00) |
