Difference between revisions of "TSS:Hg 104753.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=24369 |entrez_id=55454 |gc_percent=0.348259 |gene_alias=CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT |gene_description=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ChGn-2= | ||
| + | |GALNACT-2= | ||
| + | |GALNACT2= | ||
| + | |PRO0082= | ||
| + | |beta4GalNAcT= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=24369 | |distance_to_tss=24369 | ||
| + | |end=43179268 | ||
| + | |end_of_center_position=43179267 | ||
|entrez_id=55454 | |entrez_id=55454 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=CHGN2 | + | |gene_alias=CHGN2{{!}}ChGn-2{{!}}GALNACT-2{{!}}GALNACT2{{!}}PRO0082{{!}}beta4GalNAcT |
|gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | |gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | ||
|gene_name=CSGALNACT2 | |gene_name=CSGALNACT2 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_018590 | |nearest_refseq=NM_018590 | ||
|nearest_unigene=Hs.657569 | |nearest_unigene=Hs.657569 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=43179264 | ||
| + | |start_of_center_position=43179266 | ||
| + | |strand=+ | ||
| + | |tata_box=-71(GTGTATTAAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104753.1 | |tss_id=hg_104753.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:58, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 43179266 |
|---|---|
| End of the center position in the TSS region: | 43179267 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 24369 |
|---|---|
| Nearest PromoterID: | NM_001319656 |
| Entrez ID: | 55454 |
| Nearest Unigene: | Hs.657569 |
| Nearest Refseq: | NM_018590 |
| Nearest Ensembl: | ENSG00000169826 |
| Gene Name: | CSGALNACT2 |
| Gene Alias: | CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT |
| Gene Description: | chondroitin sulfate N-acetylgalactosaminyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -71(GTGTATTAAAGC,-,0.00) |
