Difference between revisions of "TSS:Hg 104770.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-192106 |entrez_id=6387 |gc_percent=0.467662 |gene_alias=IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 |gene_description=C-X-C motif chemokin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PBSF= | ||
| + | |SCYB12= | ||
| + | |SDF1= | ||
| + | |TLSF= | ||
| + | |TPAR1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=-192106 | |distance_to_tss=-192106 | ||
| + | |end=44577206 | ||
| + | |end_of_center_position=44577204 | ||
|entrez_id=6387 | |entrez_id=6387 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=IRH | + | |gene_alias=IRH{{!}}PBSF{{!}}SCYB12{{!}}SDF1{{!}}TLSF{{!}}TPAR1 |
|gene_description=C-X-C motif chemokine ligand 12 | |gene_description=C-X-C motif chemokine ligand 12 | ||
|gene_name=CXCL12 | |gene_name=CXCL12 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107562 | |nearest_ensembl=ENSG00000107562 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_199168 |
|nearest_refseq=NM_000609 | |nearest_refseq=NM_000609 | ||
|nearest_unigene=Hs.522891 | |nearest_unigene=Hs.522891 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=44577200 | ||
| + | |start_of_center_position=44577203 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104770.1 | |tss_id=hg_104770.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:58, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 44577203 |
|---|---|
| End of the center position in the TSS region: | 44577204 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -192106 |
|---|---|
| Nearest PromoterID: | NM_199168 |
| Entrez ID: | 6387 |
| Nearest Unigene: | Hs.522891 |
| Nearest Refseq: | NM_000609 |
| Nearest Ensembl: | ENSG00000107562 |
| Gene Name: | CXCL12 |
| Gene Alias: | IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 |
| Gene Description: | C-X-C motif chemokine ligand 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
