Difference between revisions of "TSS:Hg 10478.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |MINT= | ||
| + | |RBM15C= | ||
| + | |SHARP= | ||
| + | |all_trans= | ||
| + | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-11849 | ||
| + | |end=15835864 | ||
| + | |end_of_center_position=15835859 | ||
|entrez_id=23013 | |entrez_id=23013 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=HIAA0929 | + | |gene_alias=HIAA0929{{!}}MINT{{!}}RBM15C{{!}}SHARP |
|gene_description=spen family transcriptional repressor | |gene_description=spen family transcriptional repressor | ||
| − | |gene_name= | + | |gene_id=729614 |
| + | |gene_name=uncharacterized LOC729614 | ||
| + | |gene_source=EntrezGene:729614 | ||
| + | |gene_symbol=FLJ37453 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000065526 | |nearest_ensembl=ENSG00000065526 | ||
|nearest_promoter_id=NM_015001 | |nearest_promoter_id=NM_015001 | ||
|nearest_refseq=NM_015001 | |nearest_refseq=NM_015001 | ||
|nearest_unigene=Hs.744843 | |nearest_unigene=Hs.744843 | ||
| + | |num_trans=729614 | ||
| + | |species=human | ||
| + | |start=15835852 | ||
| + | |start_of_center_position=15835858 | ||
| + | |strand=- | ||
| + | |transcript_name=AK094772 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10478.1 | |tss_id=hg_10478.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N9F6 | ||
}} | }} | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 15835858 |
|---|---|
| End of the center position in the TSS region: | 15835859 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK094772 |
|---|---|
| Distance: | 0 |
| Num_trans: | 729614 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -11849 |
|---|---|
| Nearest PromoterID: | NM_015001 |
| Entrez ID: | 23013 |
| Nearest Unigene: | Hs.744843 |
| Nearest Refseq: | NM_015001 |
| Nearest Ensembl: | ENSG00000065526 |
| Gene Name: | uncharacterized LOC729614 |
| Gene Alias: | HIAA0929|MINT|RBM15C|SHARP |
| Gene Description: | spen family transcriptional repressor |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
