Difference between revisions of "TSS:Hg 128796.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000543317.1:-6 NR_024563:-6 uc058vjg.1:-6 ENST00000376617.3:35 uc058vjh.1:35 AK123118:74 |chr=chr12 |cpg_percent=0.035 |distance=-6 |distance_to_t...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000543317.1:-6 NR_024563 | + | |all_trans=ENST00000543317.1:-6 NR_024563:-6 ENST00000376617.3:35 AK123118:74 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=12 | |distance_to_tss=12 | ||
|end=132275409 | |end=132275409 | ||
| + | |end_of_center_position=132275403 | ||
|entrez_id=100130238 | |entrez_id=100130238 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_024563 | |nearest_refseq=NR_024563 | ||
|nearest_unigene=Hs.536338 | |nearest_unigene=Hs.536338 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=132275396 | |start=132275396 | ||
| + | |start_of_center_position=132275402 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000543317.1 NR_024563 | + | |transcript_name=ENST00000543317.1 NR_024563.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_128796.1 | |tss_id=hg_128796.1 | ||
Latest revision as of 03:59, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 132275402 |
|---|---|
| End of the center position in the TSS region: | 132275403 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000543317.1 NR_024563.1 |
|---|---|
| Distance: | -6 |
| Num_trans: | 4 |
| All_trans: | ENST00000543317.1:-6 NR_024563:-6 ENST00000376617.3:35 AK123118:74 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NR_024563 |
| Entrez ID: | 100130238 |
| Nearest Unigene: | Hs.536338 |
| Nearest Refseq: | NR_024563 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130238 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130238 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
