Difference between revisions of "TSS:Hg 104913.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1531 |entrez_id=259230 |gc_percent=0.527363 |gene_alias=MOB|MOB1|SMS1|TMEM23|hmob33 |gene_description=sphingomyelin synthase 1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MOB1= | ||
| + | |SMS1= | ||
| + | |TMEM23= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1510 | ||
| + | |end=50622466 | ||
| + | |end_of_center_position=50622446 | ||
|entrez_id=259230 | |entrez_id=259230 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=MOB | + | |gene_alias=MOB{{!}}MOB1{{!}}SMS1{{!}}TMEM23{{!}}hmob33 |
|gene_description=sphingomyelin synthase 1 | |gene_description=sphingomyelin synthase 1 | ||
|gene_name=SGMS1 | |gene_name=SGMS1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hmob33= | ||
|nearest_ensembl=ENSG00000198964 | |nearest_ensembl=ENSG00000198964 | ||
|nearest_promoter_id=NM_147156 | |nearest_promoter_id=NM_147156 | ||
|nearest_refseq=NM_147156 | |nearest_refseq=NM_147156 | ||
|nearest_unigene=Hs.654698 | |nearest_unigene=Hs.654698 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=50622425 | ||
| + | |start_of_center_position=50622445 | ||
| + | |strand=+ | ||
| + | |tata_box=81(CAGCTTTAAAGG,-,0.00),83(GCTTTAAAGGTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104913.1 | |tss_id=hg_104913.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:01, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 50622445 |
|---|---|
| End of the center position in the TSS region: | 50622446 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1510 |
|---|---|
| Nearest PromoterID: | NM_147156 |
| Entrez ID: | 259230 |
| Nearest Unigene: | Hs.654698 |
| Nearest Refseq: | NM_147156 |
| Nearest Ensembl: | ENSG00000198964 |
| Gene Name: | SGMS1 |
| Gene Alias: | MOB|MOB1|SMS1|TMEM23|hmob33 |
| Gene Description: | sphingomyelin synthase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 81(CAGCTTTAAAGG,-,0.00),83(GCTTTAAAGGTC,+,0.00) |
