Difference between revisions of "TSS:Hg 104953.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=2487 |entrez_id=22943 |gc_percent=0.40796 |gene_alias=DKK-1|SK |gene_description=dickkopf WNT signaling pathway inhibitor 1 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SK= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=NA | ||
|distance_to_tss=2487 | |distance_to_tss=2487 | ||
| + | |end=52316774 | ||
| + | |end_of_center_position=52316769 | ||
|entrez_id=22943 | |entrez_id=22943 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=DKK-1 | + | |gene_alias=DKK-1{{!}}SK |
|gene_description=dickkopf WNT signaling pathway inhibitor 1 | |gene_description=dickkopf WNT signaling pathway inhibitor 1 | ||
|gene_name=DKK1 | |gene_name=DKK1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_012242 | |nearest_refseq=NM_012242 | ||
|nearest_unigene=Hs.40499 | |nearest_unigene=Hs.40499 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=52316762 | ||
| + | |start_of_center_position=52316768 | ||
| + | |strand=+ | ||
| + | |tata_box=65(CCTTTTATATAA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104953.1 | |tss_id=hg_104953.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:02, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 52316768 |
|---|---|
| End of the center position in the TSS region: | 52316769 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2487 |
|---|---|
| Nearest PromoterID: | NM_012242 |
| Entrez ID: | 22943 |
| Nearest Unigene: | Hs.40499 |
| Nearest Refseq: | NM_012242 |
| Nearest Ensembl: | ENSG00000107984 |
| Gene Name: | DKK1 |
| Gene Alias: | DKK-1|SK |
| Gene Description: | dickkopf WNT signaling pathway inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 65(CCTTTTATATAA,+,0.00) |
