Difference between revisions of "TSS:Hg 100306.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |TSG-9= | ||
| + | |TSG9= | ||
| + | |all_trans=HGNC:31010 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=19 | ||
|distance_to_tss=867 | |distance_to_tss=867 | ||
| + | |end=25678010 | ||
| + | |end_of_center_position=25677992 | ||
|entrez_id=286319 | |entrez_id=286319 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=TSG-9 | + | |gene_alias=CCDC89B{{!}}TSG-9{{!}}TSG9 |
|gene_description=tumor suppressor candidate 1 | |gene_description=tumor suppressor candidate 1 | ||
| − | |gene_name=TUSC1 | + | |gene_id=286319 |
| + | |gene_name=tumor suppressor candidate 1 | ||
| + | |gene_source=HGNC:31010 | ||
| + | |gene_symbol=TUSC1 | ||
| + | |gene_synonyms=CCDC89B TSG-9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31010 | ||
|nearest_ensembl=ENSG00000198680 | |nearest_ensembl=ENSG00000198680 | ||
|nearest_promoter_id=NM_001004125 | |nearest_promoter_id=NM_001004125 | ||
|nearest_refseq=NM_001004125 | |nearest_refseq=NM_001004125 | ||
|nearest_unigene=Hs.26268 | |nearest_unigene=Hs.26268 | ||
| + | |num_trans=286319 | ||
| + | |species=human | ||
| + | |start=25677972 | ||
| + | |start_of_center_position=25677991 | ||
| + | |strand=- | ||
| + | |transcript_name=BC028316 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100306.1 | |tss_id=hg_100306.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:40, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 25677991 |
|---|---|
| End of the center position in the TSS region: | 25677992 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC028316 |
|---|---|
| Distance: | 19 |
| Num_trans: | 286319 |
| All_trans: | HGNC:31010 |
TATA-Box annotation
| Distance to TSS: | 867 |
|---|---|
| Nearest PromoterID: | NM_001004125 |
| Entrez ID: | 286319 |
| Nearest Unigene: | Hs.26268 |
| Nearest Refseq: | NM_001004125 |
| Nearest Ensembl: | ENSG00000198680 |
| Gene Name: | tumor suppressor candidate 1 |
| Gene Alias: | CCDC89B|TSG-9|TSG9 |
| Gene Description: | tumor suppressor candidate 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
