Difference between revisions of "TSS:Hg 100307.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=581 |entrez_id=286319 |gc_percent=0.80597 |gene_alias=TSG-9|TSG9 |gene_description=tumor suppressor candidate 1 |gene_name=TUSC...") |
|||
| (5 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |TSG-9= | ||
| + | |TSG9= | ||
| + | |all_trans=HGNC:31010 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=581 | |distance_to_tss=581 | ||
| + | |end=25678310 | ||
| + | |end_of_center_position=25678278 | ||
|entrez_id=286319 | |entrez_id=286319 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=TSG-9 | + | |gene_alias=CCDC89B{{!}}TSG-9{{!}}TSG9 |
|gene_description=tumor suppressor candidate 1 | |gene_description=tumor suppressor candidate 1 | ||
| − | |gene_name=TUSC1 | + | |gene_id=286319 |
| + | |gene_name=tumor suppressor candidate 1 | ||
| + | |gene_source=HGNC:31010 | ||
| + | |gene_symbol=TUSC1 | ||
| + | |gene_synonyms=CCDC89B TSG-9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31010 | ||
|nearest_ensembl=ENSG00000198680 | |nearest_ensembl=ENSG00000198680 | ||
|nearest_promoter_id=NM_001004125 | |nearest_promoter_id=NM_001004125 | ||
|nearest_refseq=NM_001004125 | |nearest_refseq=NM_001004125 | ||
|nearest_unigene=Hs.26268 | |nearest_unigene=Hs.26268 | ||
| + | |num_trans=286319 | ||
| + | |species=human | ||
| + | |start=25678244 | ||
| + | |start_of_center_position=25678277 | ||
| + | |strand=- | ||
| + | |transcript_name=BC046919 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100307.1 | |tss_id=hg_100307.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:40, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 25678277 |
|---|---|
| End of the center position in the TSS region: | 25678278 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC046919 |
|---|---|
| Distance: | 0 |
| Num_trans: | 286319 |
| All_trans: | HGNC:31010 |
TATA-Box annotation
| Distance to TSS: | 581 |
|---|---|
| Nearest PromoterID: | NM_001004125 |
| Entrez ID: | 286319 |
| Nearest Unigene: | Hs.26268 |
| Nearest Refseq: | NM_001004125 |
| Nearest Ensembl: | ENSG00000198680 |
| Gene Name: | tumor suppressor candidate 1 |
| Gene Alias: | CCDC89B|TSG-9|TSG9 |
| Gene Description: | tumor suppressor candidate 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
