Difference between revisions of "TSS:Hg 131923.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000439236.6:381 NM_001292024:381 NM_001292023:381 uc058qmg.1:381 |chr=chr12 |cpg_percent=0.015 |distance=381 |distance_to_tss=-391 |end=65882569 |...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000439236.6 | + | |all_trans=NR_158985:223 NR_158984:223 ENST00000439236.6:381 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=223 |
| − | |distance_to_tss=- | + | |distance_to_tss=-233 |
|end=65882569 | |end=65882569 | ||
| + | |end_of_center_position=65882559 | ||
|entrez_id=100129940 | |entrez_id=100129940 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=HMGA2 antisense RNA 1 |
|gene_id=100129940 | |gene_id=100129940 | ||
| − | |gene_name= | + | |gene_name=HMGA2 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:53973 |
| − | |gene_symbol= | + | |gene_symbol=HMGA2-AS1 |
| − | |gene_synonyms= | + | |gene_synonyms=RP11-366L20.2 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53973 |
|nearest_ensembl=ENSG00000197301 | |nearest_ensembl=ENSG00000197301 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_158984 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_120478 |
|nearest_unigene=Hs.685856 | |nearest_unigene=Hs.685856 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=65882547 | |start=65882547 | ||
| + | |start_of_center_position=65882558 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_158985.1 NR_158984.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_131923.1 | |tss_id=hg_131923.1 | ||
Latest revision as of 05:07, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65882558 |
|---|---|
| End of the center position in the TSS region: | 65882559 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_158985.1 NR_158984.1 |
|---|---|
| Distance: | 223 |
| Num_trans: | 3 |
| All_trans: | NR_158985:223 NR_158984:223 ENST00000439236.6:381 |
TATA-Box annotation
| Distance to TSS: | -233 |
|---|---|
| Nearest PromoterID: | NR_158984 |
| Entrez ID: | 100129940 |
| Nearest Unigene: | Hs.685856 |
| Nearest Refseq: | NR_120478 |
| Nearest Ensembl: | ENSG00000197301 |
| Gene Name: | HMGA2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | HMGA2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
