Difference between revisions of "TSS:Hg 105256.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=40287 |entrez_id=80312 |gc_percent=0.487562 |gene_alias=CXXC6|LCX|MLL-TET1|TET1-MLL|bA119F7.1 |gene_description=tet methylcytos...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LCX= | ||
| + | |MLL-TET1= | ||
| + | |TET1-MLL= | ||
| + | |bA119F7.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=40310 | ||
| + | |end=68600653 | ||
| + | |end_of_center_position=68600647 | ||
|entrez_id=80312 | |entrez_id=80312 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=CXXC6 | + | |gene_alias=CXXC6{{!}}LCX{{!}}bA119F7.1 |
|gene_description=tet methylcytosine dioxygenase 1 | |gene_description=tet methylcytosine dioxygenase 1 | ||
|gene_name=TET1 | |gene_name=TET1 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_030625 | |nearest_refseq=NM_030625 | ||
|nearest_unigene=Hs.258855 | |nearest_unigene=Hs.258855 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=68600640 | ||
| + | |start_of_center_position=68600646 | ||
| + | |strand=+ | ||
| + | |tata_box=-33(GCCTTTAAACAC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105256.1 | |tss_id=hg_105256.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68600646 |
|---|---|
| End of the center position in the TSS region: | 68600647 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 40310 |
|---|---|
| Nearest PromoterID: | NM_030625 |
| Entrez ID: | 80312 |
| Nearest Unigene: | Hs.258855 |
| Nearest Refseq: | NM_030625 |
| Nearest Ensembl: | ENSG00000138336 |
| Gene Name: | TET1 |
| Gene Alias: | CXXC6|LCX|bA119F7.1 |
| Gene Description: | tet methylcytosine dioxygenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCCTTTAAACAC,+,0.00) |
