Difference between revisions of "TSS:Hg 105306.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=2421 |entrez_id=5552 |gc_percent=0.492537 |gene_alias=PPG|PRG|PRG1 |gene_description=serglycin |gene_name=SRGN |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRG= | ||
| + | |PRG1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=2346 | ||
| + | |end=69090458 | ||
| + | |end_of_center_position=69090449 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=PPG | + | |gene_alias=PPG{{!}}PRG{{!}}PRG1 |
|gene_description=serglycin | |gene_description=serglycin | ||
|gene_name=SRGN | |gene_name=SRGN | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002727 |
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=69090439 | ||
| + | |start_of_center_position=69090448 | ||
| + | |strand=+ | ||
| + | |tata_box=63(GCTTATAGATGG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105306.1 | |tss_id=hg_105306.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69090448 |
|---|---|
| End of the center position in the TSS region: | 69090449 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2346 |
|---|---|
| Nearest PromoterID: | NM_002727 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | SRGN |
| Gene Alias: | PPG|PRG|PRG1 |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 63(GCTTATAGATGG,+,0.00) |
