Difference between revisions of "TSS:Hg 105324.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Hbeta58= | ||
| + | |PEP8A= | ||
| + | |VPS26= | ||
| + | |all_trans=HGNC:12711 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=75 | ||
|distance_to_tss=-86 | |distance_to_tss=-86 | ||
| + | |end=69124077 | ||
| + | |end_of_center_position=69124068 | ||
|entrez_id=9559 | |entrez_id=9559 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=HB58 | + | |gene_alias=HB58{{!}}Hbeta58{{!}}PEP8A{{!}}VPS26 |
| − | |gene_description= | + | |gene_description=VPS26, retromer complex component A |
| − | |gene_name=VPS26A | + | |gene_id=9559 |
| + | |gene_name=VPS26, retromer complex component A | ||
| + | |gene_source=HGNC:12711 | ||
| + | |gene_symbol=VPS26A | ||
| + | |gene_synonyms=Hbeta58 PEP8A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12711 | ||
|nearest_ensembl=ENSG00000122958 | |nearest_ensembl=ENSG00000122958 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001035260 |
|nearest_refseq=NM_004896 | |nearest_refseq=NM_004896 | ||
|nearest_unigene=Hs.499925 | |nearest_unigene=Hs.499925 | ||
| + | |num_trans=9559 | ||
| + | |species=human | ||
| + | |start=69124057 | ||
| + | |start_of_center_position=69124067 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000395098.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105324.1 | |tss_id=hg_105324.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75436 | ||
}} | }} | ||
Latest revision as of 19:28, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69124067 |
|---|---|
| End of the center position in the TSS region: | 69124068 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000395098.5 |
|---|---|
| Distance: | 75 |
| Num_trans: | 9559 |
| All_trans: | HGNC:12711 |
TATA-Box annotation
| Distance to TSS: | -86 |
|---|---|
| Nearest PromoterID: | NM_001035260 |
| Entrez ID: | 9559 |
| Nearest Unigene: | Hs.499925 |
| Nearest Refseq: | NM_004896 |
| Nearest Ensembl: | ENSG00000122958 |
| Gene Name: | VPS26, retromer complex component A |
| Gene Alias: | HB58|Hbeta58|PEP8A|VPS26 |
| Gene Description: | VPS26, retromer complex component A |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
