Difference between revisions of "TSS:Hg 100330.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=0 |entrez_id=64922 |gc_percent=0.293532 |gene_alias=- |gene_description=leucine rich repeat containing 19 |gene_name=LRRC19 |gen...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23379 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-21 | ||
| + | |end=27005697 | ||
| + | |end_of_center_position=27005693 | ||
|entrez_id=64922 | |entrez_id=64922 | ||
|gc_percent=0.293532 | |gc_percent=0.293532 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=leucine rich repeat containing 19 | |gene_description=leucine rich repeat containing 19 | ||
| − | |gene_name=LRRC19 | + | |gene_id=64922 |
| + | |gene_name=leucine rich repeat containing 19 | ||
| + | |gene_source=HGNC:23379 | ||
| + | |gene_symbol=LRRC19 | ||
| + | |gene_synonyms=FLJ21302 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23379 | ||
|nearest_ensembl=ENSG00000184434 | |nearest_ensembl=ENSG00000184434 | ||
|nearest_promoter_id=NM_022901 | |nearest_promoter_id=NM_022901 | ||
|nearest_refseq=NM_022901 | |nearest_refseq=NM_022901 | ||
|nearest_unigene=Hs.128071 | |nearest_unigene=Hs.128071 | ||
| + | |num_trans=64922 | ||
| + | |species=human | ||
| + | |start=27005688 | ||
| + | |start_of_center_position=27005692 | ||
| + | |strand=- | ||
| + | |transcript_name=BC056252 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100330.1 | |tss_id=hg_100330.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27005692 |
|---|---|
| End of the center position in the TSS region: | 27005693 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC056252 |
|---|---|
| Distance: | 0 |
| Num_trans: | 64922 |
| All_trans: | HGNC:23379 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_022901 |
| Entrez ID: | 64922 |
| Nearest Unigene: | Hs.128071 |
| Nearest Refseq: | NM_022901 |
| Nearest Ensembl: | ENSG00000184434 |
| Gene Name: | leucine rich repeat containing 19 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.293532 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
