Difference between revisions of "TSS:Hg 100331.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |C9orf11= | ||
| + | |SPACA8= | ||
| + | |all_trans=HGNC:1359 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=27297116 | ||
| + | |end_of_center_position=27297107 | ||
|entrez_id=54586 | |entrez_id=54586 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=AFAF | + | |gene_alias=AFAF{{!}}C9orf11{{!}}SPACA8 |
|gene_description=equatorin | |gene_description=equatorin | ||
| − | |gene_name=EQTN | + | |gene_id=54586 |
| + | |gene_name=equatorin | ||
| + | |gene_source=HGNC:1359 | ||
| + | |gene_symbol=EQTN | ||
| + | |gene_synonyms=AFAF SPACA8 equatorin | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1359 | ||
|nearest_ensembl=ENSG00000120160 | |nearest_ensembl=ENSG00000120160 | ||
|nearest_promoter_id=NM_001161585 | |nearest_promoter_id=NM_001161585 | ||
|nearest_refseq=NM_020641 | |nearest_refseq=NM_020641 | ||
|nearest_unigene=Hs.163070 | |nearest_unigene=Hs.163070 | ||
| + | |num_trans=54586 | ||
| + | |species=human | ||
| + | |start=27297097 | ||
| + | |start_of_center_position=27297106 | ||
| + | |strand=- | ||
| + | |transcript_name=BC137351 BC137352 BC144602 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100331.1 | |tss_id=hg_100331.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 27297106 |
|---|---|
| End of the center position in the TSS region: | 27297107 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC137351 BC137352 BC144602 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54586 |
| All_trans: | HGNC:1359 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001161585 |
| Entrez ID: | 54586 |
| Nearest Unigene: | Hs.163070 |
| Nearest Refseq: | NM_020641 |
| Nearest Ensembl: | ENSG00000120160 |
| Gene Name: | equatorin |
| Gene Alias: | AFAF|C9orf11|SPACA8 |
| Gene Description: | equatorin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
