Difference between revisions of "TSS:Hg 105508.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=34042 |entrez_id=54788 |gc_percent=0.631841 |gene_alias=DJ10 |gene_description=DnaJ heat shock protein family (Hsp40) member B1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=33812 | ||
| + | |end=72321126 | ||
| + | |end_of_center_position=72321108 | ||
|entrez_id=54788 | |entrez_id=54788 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148719 | |nearest_ensembl=ENSG00000148719 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_017626 |
|nearest_refseq=NM_017626 | |nearest_refseq=NM_017626 | ||
|nearest_unigene=Hs.500013 | |nearest_unigene=Hs.500013 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=72321088 | ||
| + | |start_of_center_position=72321107 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105508.1 | |tss_id=hg_105508.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72321107 |
|---|---|
| End of the center position in the TSS region: | 72321108 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 33812 |
|---|---|
| Nearest PromoterID: | NM_017626 |
| Entrez ID: | 54788 |
| Nearest Unigene: | Hs.500013 |
| Nearest Refseq: | NM_017626 |
| Nearest Ensembl: | ENSG00000148719 |
| Gene Name: | DNAJB12 |
| Gene Alias: | DJ10 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member B12 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
