Difference between revisions of "TSS:Hg 105522.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=1342 |entrez_id=5033 |gc_percent=0.447761 |gene_alias=P4HA |gene_description=prolyl 4-hydroxylase subunit alpha 1 |gene_name=P4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=NA | ||
|distance_to_tss=1342 | |distance_to_tss=1342 | ||
| + | |end=73095641 | ||
| + | |end_of_center_position=73095632 | ||
|entrez_id=5033 | |entrez_id=5033 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122884 | |nearest_ensembl=ENSG00000122884 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000917 |
|nearest_refseq=NM_000917 | |nearest_refseq=NM_000917 | ||
|nearest_unigene=Hs.500047 | |nearest_unigene=Hs.500047 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=73095622 | ||
| + | |start_of_center_position=73095631 | ||
| + | |strand=+ | ||
| + | |tata_box=73(CCTTTTAGATCA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105522.1 | |tss_id=hg_105522.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:16, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 73095631 |
|---|---|
| End of the center position in the TSS region: | 73095632 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1342 |
|---|---|
| Nearest PromoterID: | NM_000917 |
| Entrez ID: | 5033 |
| Nearest Unigene: | Hs.500047 |
| Nearest Refseq: | NM_000917 |
| Nearest Ensembl: | ENSG00000122884 |
| Gene Name: | P4HA1 |
| Gene Alias: | P4HA |
| Gene Description: | prolyl 4-hydroxylase subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 73(CCTTTTAGATCA,+,0.00) |
