Difference between revisions of "TSS:Hg 135992.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000356711.6:189 NM_015011:189 uc001vqt.1:189 AB020672:189 BC146791:189 AL834447:219 |chr=chr13 |cpg_percent=0.005 |distance=189 |distance_to_tss=-...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MYR8= |
| + | |Myo16b= | ||
| + | |NYAP3= | ||
| + | |PPP1R107= | ||
| + | |all_trans=NM_015011:-39 ENST00000356711.7:189 AB020672:189 BC146791:189 ENST00000251041.10:219 AL834447:219 | ||
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-39 |
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=108595963 | |end=108595963 | ||
| + | |end_of_center_position=108595954 | ||
|entrez_id=23026 | |entrez_id=23026 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=MYAP3 | + | |gene_alias=MYAP3{{!}}MYR8{{!}}Myo16b{{!}}NYAP3{{!}}PPP1R107 |
|gene_description=myosin XVI | |gene_description=myosin XVI | ||
|gene_id=23026 | |gene_id=23026 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=108595943 | |start=108595943 | ||
| + | |start_of_center_position=108595953 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=6(AGTCATAAAAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=NM_015011.3 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_135992.1 | |tss_id=hg_135992.1 | ||
Latest revision as of 06:35, 20 July 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 108595953 |
|---|---|
| End of the center position in the TSS region: | 108595954 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_015011.3 |
|---|---|
| Distance: | -39 |
| Num_trans: | 6 |
| All_trans: | NM_015011:-39 ENST00000356711.7:189 AB020672:189 BC146791:189 ENST00000251041.10:219 AL834447:219 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_015011 |
| Entrez ID: | 23026 |
| Nearest Unigene: | Hs.656587 |
| Nearest Refseq: | NM_015011 |
| Nearest Ensembl: | ENSG00000041515 |
| Gene Name: | myosin XVI |
| Gene Alias: | MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 |
| Gene Description: | myosin XVI |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 6(AGTCATAAAAGG,-,0.00) |
