Difference between revisions of "TSS:Hg 100362.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-17353 |entrez_id=203228 |gc_percent=0.368159 |gene_alias=ALSFTD|DENNL72|FTDALS|FTDALS1 |gene_description=chromosome 9 open rea...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DENND9= | ||
| + | |DENNL72= | ||
| + | |FTDALS= | ||
| + | |FTDALS1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=-17353 | |distance_to_tss=-17353 | ||
| + | |end=27591234 | ||
| + | |end_of_center_position=27591220 | ||
|entrez_id=203228 | |entrez_id=203228 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=ALSFTD | + | |gene_alias=ALSFTD{{!}}DENND9{{!}}DENNL72{{!}}FTDALS{{!}}FTDALS1 |
| − | |gene_description= | + | |gene_description=C9orf72-SMCR8 complex subunit |
|gene_name=C9orf72 | |gene_name=C9orf72 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_018325 | |nearest_refseq=NM_018325 | ||
|nearest_unigene=Hs.493639 | |nearest_unigene=Hs.493639 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=27591204 | ||
| + | |start_of_center_position=27591219 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100362.1 | |tss_id=hg_100362.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27591219 |
|---|---|
| End of the center position in the TSS region: | 27591220 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -17353 |
|---|---|
| Nearest PromoterID: | NM_001256054 |
| Entrez ID: | 203228 |
| Nearest Unigene: | Hs.493639 |
| Nearest Refseq: | NM_018325 |
| Nearest Ensembl: | ENSG00000147894 |
| Gene Name: | C9orf72 |
| Gene Alias: | ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 |
| Gene Description: | C9orf72-SMCR8 complex subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
