Difference between revisions of "TSS:Hg 136493.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000471771.5:-1 uc058wbe.1:-1 ENST00000461838.5:-91 uc058wbc.1:-91 ENST00000485959.5:-103 uc058wbh.1:-103 ENST00000493719.5:-124 uc058wbf.1:-124 BC...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:29788 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=154 | |distance_to_tss=154 | ||
|end=27450040 | |end=27450040 | ||
| + | |end_of_center_position=27450035 | ||
|entrez_id=219402 | |entrez_id=219402 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_152912 | |nearest_refseq=NM_152912 | ||
|nearest_unigene=Hs.534582 | |nearest_unigene=Hs.534582 | ||
| − | |num_trans= | + | |num_trans=219402 |
|species=human | |species=human | ||
|start=27450029 | |start=27450029 | ||
| + | |start_of_center_position=27450034 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000471771.5 | + | |transcript_name=ENST00000471771.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_136493.1 | |tss_id=hg_136493.1 | ||
Latest revision as of 06:46, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27450034 |
|---|---|
| End of the center position in the TSS region: | 27450035 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000471771.5 |
|---|---|
| Distance: | -1 |
| Num_trans: | 219402 |
| All_trans: | HGNC:29788 |
TATA-Box annotation
| Distance to TSS: | 154 |
|---|---|
| Nearest PromoterID: | NM_001166262 |
| Entrez ID: | 219402 |
| Nearest Unigene: | Hs.534582 |
| Nearest Refseq: | NM_152912 |
| Nearest Ensembl: | ENSG00000122033 |
| Gene Name: | mitochondrial translational initiation factor 3 |
| Gene Alias: | IF3mt |
| Gene Description: | mitochondrial translational initiation factor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
