Difference between revisions of "TSS:Hg 105880.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=31751 |entrez_id=81619 |gc_percent=0.532338 |gene_alias=DC-TM4F2|TM4SF14 |gene_description=tetraspanin 14 |gene_name=TSPAN14 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TM4SF14= | ||
| + | |all_trans=LF334053:-262 MA569630:-262 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=-262 |
| + | |distance_to_tss=17770 | ||
| + | |end=80486045 | ||
| + | |end_of_center_position=80486033 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=DC-TM4F2 | + | |gene_alias=DC-TM4F2{{!}}TM4SF14{{!}}tspan-14 |
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
|gene_name=TSPAN14 | |gene_name=TSPAN14 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351272 |
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.308615 |
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=80486020 | ||
| + | |start_of_center_position=80486032 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF334053 MA569630 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105880.1 | |tss_id=hg_105880.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:24, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 80486032 |
|---|---|
| End of the center position in the TSS region: | 80486033 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF334053 MA569630 |
|---|---|
| Distance: | -262 |
| Num_trans: | 2 |
| All_trans: | LF334053:-262 MA569630:-262 |
TATA-Box annotation
| Distance to TSS: | 17770 |
|---|---|
| Nearest PromoterID: | NM_001351272 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.308615 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | TSPAN14 |
| Gene Alias: | DC-TM4F2|TM4SF14|tspan-14 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
