Difference between revisions of "TSS:Hg 10193.1"
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{{TSSDetail | {{TSSDetail | ||
|GLUT5= | |GLUT5= | ||
| − | |all_trans= | + | |all_trans=HGNC:11010 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=25 |
| − | |distance_to_tss= | + | |distance_to_tss=-55 |
|end=9069703 | |end=9069703 | ||
|end_of_center_position=9069690 | |end_of_center_position=9069690 | ||
|entrez_id=6518 | |entrez_id=6518 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=GLUT-5 | + | |gene_alias=GLUT-5{{!}}GLUT5 |
|gene_description=solute carrier family 2 member 5 | |gene_description=solute carrier family 2 member 5 | ||
|gene_id=6518 | |gene_id=6518 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:11010 | |hgnc_mgi_id=HGNC:11010 | ||
|nearest_ensembl=ENSG00000142583 | |nearest_ensembl=ENSG00000142583 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001135585 |
|nearest_refseq=NM_003039 | |nearest_refseq=NM_003039 | ||
|nearest_unigene=Hs.530003 | |nearest_unigene=Hs.530003 | ||
| − | |num_trans= | + | |num_trans=6518 |
|species=human | |species=human | ||
|start=9069676 | |start=9069676 | ||
|start_of_center_position=9069689 | |start_of_center_position=9069689 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-39(TCATTTAAAAGC,-,0.00),23(GGCTATAAAAAT,-,0.00) |
| − | |transcript_name= | + | |transcript_name=AK294368 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10193.1 | |tss_id=hg_10193.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B4DG19 |
}} | }} | ||
Latest revision as of 18:16, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9069689 |
|---|---|
| End of the center position in the TSS region: | 9069690 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK294368 |
|---|---|
| Distance: | 25 |
| Num_trans: | 6518 |
| All_trans: | HGNC:11010 |
TATA-Box annotation
| Distance to TSS: | -55 |
|---|---|
| Nearest PromoterID: | NM_001135585 |
| Entrez ID: | 6518 |
| Nearest Unigene: | Hs.530003 |
| Nearest Refseq: | NM_003039 |
| Nearest Ensembl: | ENSG00000142583 |
| Gene Name: | solute carrier family 2 member 5 |
| Gene Alias: | GLUT-5|GLUT5 |
| Gene Description: | solute carrier family 2 member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -39(TCATTTAAAAGC,-,0.00),23(GGCTATAAAAAT,-,0.00) |
