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Difference between revisions of "TSS:Hg 10210.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=EF570048:23 NR_132742:-186 EF609116:-186 ENST00000635687.1:-240 EF592573:-240
+
|all_trans=HGNC:51913
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 9: Line 9:
 
|entrez_id=102724571
 
|entrez_id=102724571
 
|gc_percent=0.701493
 
|gc_percent=0.701493
|gene_alias=-
+
|gene_alias=GUARDIN{{!}}LINC01759
|gene_description=long intergenic non-protein coding RNA 1759
+
|gene_description=long non coding transcriptional activator of miR34a
 
|gene_id=106614088
 
|gene_id=106614088
 
|gene_name=MIR34A host gene
 
|gene_name=MIR34A host gene
Line 22: Line 22:
 
|nearest_refseq=NR_132738
 
|nearest_refseq=NR_132738
 
|nearest_unigene=Hs.599298
 
|nearest_unigene=Hs.599298
|num_trans=5
+
|num_trans=106614088
 
|species=human
 
|species=human
 
|start=9182127
 
|start=9182127

Latest revision as of 18:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_10210.1
Species:human
Chr:chr1
TSS Classification:yes
Start:9182127
End:9182152
Strand:-
TSS Score:1
Start of the center position in the TSS region:9182139
End of the center position in the TSS region:9182140



Gene and protein annotation


Transcript_name:EF570048
Distance:23
GeneID:106614088
HGNC/MGI_ID:HGNC:51913
UniProt_ID:
Gene_name:MIR34A host gene
Gene_symbol:MIR34AHG
Gene_synonyms:
Gene_source:HGNC:51913



Transcript annotation


Transcript_name:EF570048
Distance:23
Num_trans:106614088
All_trans:HGNC:51913



TATA-Box annotation


Distance to TSS:-64
Nearest PromoterID:NR_132738
Entrez ID:102724571
Nearest Unigene:Hs.599298
Nearest Refseq:NR_132738
Nearest Ensembl:ENSG00000234546
Gene Name:MIR34A host gene
Gene Alias:GUARDIN|LINC01759
Gene Description:long non coding transcriptional activator of miR34a
Gene Type:ncRNA
CpG%:0.085
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):