Difference between revisions of "TSS:Hg 10222.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PNC1= | |PNC1= | ||
| − | |all_trans=ENST00000441033 | + | |all_trans=ENST00000441033.1:-84 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=-84 | |distance=-84 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-36084 |
|end=9503387 | |end=9503387 | ||
|end_of_center_position=9503381 | |end_of_center_position=9503381 | ||
|entrez_id=84275 | |entrez_id=84275 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=BMSC-MCP | + | |gene_alias=BMSC-MCP{{!}}PNC1 |
|gene_description=solute carrier family 25 member 33 | |gene_description=solute carrier family 25 member 33 | ||
|gene_name=SLC25A33 | |gene_name=SLC25A33 | ||
| Line 18: | Line 18: | ||
|nearest_refseq=NM_032315 | |nearest_refseq=NM_032315 | ||
|nearest_unigene=Hs.568613 | |nearest_unigene=Hs.568613 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=9503374 | |start=9503374 | ||
|start_of_center_position=9503380 | |start_of_center_position=9503380 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000441033 | + | |transcript_name=ENST00000441033.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10222.1 | |tss_id=hg_10222.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9503380 |
|---|---|
| End of the center position in the TSS region: | 9503381 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000441033.1 |
|---|---|
| Distance: | -84 |
| Num_trans: | 1 |
| All_trans: | ENST00000441033.1:-84 |
TATA-Box annotation
| Distance to TSS: | -36084 |
|---|---|
| Nearest PromoterID: | NM_032315 |
| Entrez ID: | 84275 |
| Nearest Unigene: | Hs.568613 |
| Nearest Refseq: | NM_032315 |
| Nearest Ensembl: | ENSG00000171612 |
| Gene Name: | SLC25A33 |
| Gene Alias: | BMSC-MCP|PNC1 |
| Gene Description: | solute carrier family 25 member 33 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
