Difference between revisions of "TSS:Hg 105989.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=42649 |entrez_id=11155 |gc_percent=0.766169 |gene_alias=CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP |g...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CMH24= | ||
| + | |CMPD3= | ||
| + | |CYPHER= | ||
| + | |LDB3Z1= | ||
| + | |LDB3Z4= | ||
| + | |LVNC3= | ||
| + | |MFM4= | ||
| + | |ORACLE= | ||
| + | |PDLIM6= | ||
| + | |ZASP= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=42754 | ||
| + | |end=86711328 | ||
| + | |end_of_center_position=86711319 | ||
|entrez_id=11155 | |entrez_id=11155 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=CMD1C | + | |gene_alias=CMD1C{{!}}CMH24{{!}}CMPD3{{!}}CYPHER{{!}}LDB3Z1{{!}}LDB3Z4{{!}}LVNC3{{!}}MFM4{{!}}ORACLE{{!}}PDLIM6{{!}}ZASP |
|gene_description=LIM domain binding 3 | |gene_description=LIM domain binding 3 | ||
|gene_name=LDB3 | |gene_name=LDB3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122367 | |nearest_ensembl=ENSG00000122367 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001080116 |
|nearest_refseq=NM_007078 | |nearest_refseq=NM_007078 | ||
|nearest_unigene=Hs.657271 | |nearest_unigene=Hs.657271 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=86711308 | ||
| + | |start_of_center_position=86711318 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105989.1 | |tss_id=hg_105989.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86711318 |
|---|---|
| End of the center position in the TSS region: | 86711319 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 42754 |
|---|---|
| Nearest PromoterID: | NM_001080116 |
| Entrez ID: | 11155 |
| Nearest Unigene: | Hs.657271 |
| Nearest Refseq: | NM_007078 |
| Nearest Ensembl: | ENSG00000122367 |
| Gene Name: | LDB3 |
| Gene Alias: | CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP |
| Gene Description: | LIM domain binding 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
