Difference between revisions of "TSS:Hg 92922.1"
From referenceTSS
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| Line 8: | Line 8: | ||
|RAM1= | |RAM1= | ||
|Ram-1= | |Ram-1= | ||
| − | |all_trans=NM_006749: | + | |all_trans=NM_006749:184 ENST00000342228.7:212 BC028600:213 GQ900924:213 LF384344:213 MA619921:213 ENST00000524237.1:427 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=184 |
| − | |distance_to_tss= | + | |distance_to_tss=-191 |
|end=42542153 | |end=42542153 | ||
|end_of_center_position=42542146 | |end_of_center_position=42542146 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=GLVR-2 | + | |gene_alias=GLVR-2{{!}}GLVR2{{!}}IBGC1{{!}}IBGC3{{!}}MLVAR{{!}}PIT-2{{!}}PIT2{{!}}RAM1{{!}}Ram-1 |
|gene_description=solute carrier family 20 member 2 | |gene_description=solute carrier family 20 member 2 | ||
|gene_id=6575 | |gene_id=6575 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_006749 | |nearest_refseq=NM_006749 | ||
|nearest_unigene=Hs.653173 | |nearest_unigene=Hs.653173 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=42542137 | |start=42542137 | ||
|start_of_center_position=42542145 | |start_of_center_position=42542145 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_006749 | + | |transcript_name=NM_006749.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92922.1 | |tss_id=hg_92922.1 | ||
Latest revision as of 16:07, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 42542145 |
|---|---|
| End of the center position in the TSS region: | 42542146 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_006749.5 |
|---|---|
| Distance: | 184 |
| Num_trans: | 7 |
| All_trans: | NM_006749:184 ENST00000342228.7:212 BC028600:213 GQ900924:213 LF384344:213 MA619921:213 ENST00000524237.1:427 |
TATA-Box annotation
| Distance to TSS: | -191 |
|---|---|
| Nearest PromoterID: | NM_006749 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
