Difference between revisions of "TSS:Hg 10544.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
|NBG= | |NBG= | ||
|NBPF= | |NBPF= | ||
| − | |all_trans= | + | |all_trans=HGNC:26088 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 14: | Line 14: | ||
|entrez_id=55672 | |entrez_id=55672 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=AB13 | + | |gene_alias=AB13{{!}}AB14{{!}}AB23{{!}}AD2{{!}}NBG{{!}}NBPF |
| − | |gene_description= | + | |gene_description=NBPF member 1 |
|gene_id=55672 | |gene_id=55672 | ||
| − | |gene_name= | + | |gene_name=NBPF member 1 |
|gene_source=HGNC:26088 | |gene_source=HGNC:26088 | ||
|gene_symbol=NBPF1 | |gene_symbol=NBPF1 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_017940 | |nearest_refseq=NM_017940 | ||
|nearest_unigene=Hs.467587 | |nearest_unigene=Hs.467587 | ||
| − | |num_trans= | + | |num_trans=55672 |
|species=human | |species=human | ||
|start=16613481 | |start=16613481 | ||
|start_of_center_position=16613487 | |start_of_center_position=16613487 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000430580.6 ENST00000432949.5 | + | |transcript_name=ENST00000430580.6 ENST00000432949.5 AY894575 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10544.1 | |tss_id=hg_10544.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=S4R2X0 | + | |uniprot_id=Q3BBV0 S4R2X0 |
}} | }} | ||
Latest revision as of 19:31, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16613487 |
|---|---|
| End of the center position in the TSS region: | 16613488 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000430580.6 ENST00000432949.5 AY894575 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55672 |
| All_trans: | HGNC:26088 |
TATA-Box annotation
| Distance to TSS: | 118 |
|---|---|
| Nearest PromoterID: | NM_017940 |
| Entrez ID: | 55672 |
| Nearest Unigene: | Hs.467587 |
| Nearest Refseq: | NM_017940 |
| Nearest Ensembl: | ENSG00000219481 |
| Gene Name: | NBPF member 1 |
| Gene Alias: | AB13|AB14|AB23|AD2|NBG|NBPF |
| Gene Description: | NBPF member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
