Difference between revisions of "TSS:Hg 10622.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:27006 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-305 | |distance=-305 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1296 |
|end=18955393 | |end=18955393 | ||
|end_of_center_position=18955380 | |end_of_center_position=18955380 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001136265 | |nearest_refseq=NM_001136265 | ||
|nearest_unigene=Hs.466625 | |nearest_unigene=Hs.466625 | ||
| − | |num_trans= | + | |num_trans=126917 |
|species=human | |species=human | ||
|start=18955366 | |start=18955366 | ||
|start_of_center_position=18955379 | |start_of_center_position=18955379 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000416166 | + | |transcript_name=ENST00000416166.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10622.1 | |tss_id=hg_10622.1 | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 18955379 |
|---|---|
| End of the center position in the TSS region: | 18955380 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000416166.1 |
|---|---|
| Distance: | -305 |
| Num_trans: | 126917 |
| All_trans: | HGNC:27006 |
TATA-Box annotation
| Distance to TSS: | 1296 |
|---|---|
| Nearest PromoterID: | NM_001136265 |
| Entrez ID: | 126917 |
| Nearest Unigene: | Hs.466625 |
| Nearest Refseq: | NM_001136265 |
| Nearest Ensembl: | ENSG00000169991 |
| Gene Name: | intermediate filament family orphan 2 |
| Gene Alias: | - |
| Gene Description: | intermediate filament family orphan 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
