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Difference between revisions of "TSS:Hg 89122.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NR_034102:477
+
|all_trans=HGNC:48723
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.015
 
|cpg_percent=0.015
|distance=477
+
|distance=410
 
|distance_to_tss=-480
 
|distance_to_tss=-480
 
|end=64372741
 
|end=64372741
Line 22: Line 22:
 
|nearest_refseq=NR_034102
 
|nearest_refseq=NR_034102
 
|nearest_unigene=Hs.7023
 
|nearest_unigene=Hs.7023
|num_trans=1
+
|num_trans=100130155
 
|species=human
 
|species=human
 
|start=64372735
 
|start=64372735
 
|start_of_center_position=64372738
 
|start_of_center_position=64372738
 
|strand=+
 
|strand=+
|tata_box="-70(CCCCATAAAAGA,-,0.00),-18(CCATTTTAAAGC,-,0.00)"
+
|tata_box=-70(CCCCATAAAAGA,-,0.00),-18(CCATTTTAAAGC,-,0.00)
|transcript_name=NR_034102
+
|transcript_name=ENST00000665390.1
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_89122.1
 
|tss_id=hg_89122.1

Latest revision as of 14:45, 22 July 2021

Basic information about the TSS


TSS ID:hg_89122.1
Species:human
Chr:chr8
TSS Classification:yes
Start:64372735
End:64372741
Strand:+
TSS Score:1
Start of the center position in the TSS region:64372738
End of the center position in the TSS region:64372739



Gene and protein annotation


Transcript_name:ENST00000665390.1
Distance:410
GeneID:100130155
HGNC/MGI_ID:HGNC:48723
UniProt_ID:
Gene_name:MIR124-2 host gene
Gene_symbol:MIR124-2HG
Gene_synonyms:
Gene_source:HGNC:48723



Transcript annotation


Transcript_name:ENST00000665390.1
Distance:410
Num_trans:100130155
All_trans:HGNC:48723



TATA-Box annotation


Distance to TSS:-480
Nearest PromoterID:NR_034102
Entrez ID:100130155
Nearest Unigene:Hs.7023
Nearest Refseq:NR_034102
Nearest Ensembl:ENSG00000254377
Gene Name:MIR124-2 host gene
Gene Alias:LINC00966
Gene Description:MIR124-2 host gene
Gene Type:ncRNA
CpG%:0.015
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-70(CCCCATAAAAGA,-,0.00),-18(CCATTTTAAAGC,-,0.00)