Difference between revisions of "TSS:Hg 106082.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-7028 |entrez_id=100132116 |gc_percent=0.378109 |gene_alias=ZXF1|uc001kfo.1 |gene_description=ACTA2 antisense RNA 1 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=-7028 | |distance_to_tss=-7028 | ||
| + | |end=88925656 | ||
| + | |end_of_center_position=88925656 | ||
|entrez_id=100132116 | |entrez_id=100132116 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=ZXF1 | + | |gene_alias=UC001kfo{{!}}ZXF1{{!}}uc001kfo.1 |
|gene_description=ACTA2 antisense RNA 1 | |gene_description=ACTA2 antisense RNA 1 | ||
|gene_name=ACTA2-AS1 | |gene_name=ACTA2-AS1 | ||
| Line 11: | Line 15: | ||
|nearest_promoter_id=NR_125373 | |nearest_promoter_id=NR_125373 | ||
|nearest_refseq=NR_125373 | |nearest_refseq=NR_125373 | ||
| − | |nearest_unigene= | + | |nearest_unigene= |
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=88925655 | ||
| + | |start_of_center_position=88925655 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106082.1 | |tss_id=hg_106082.1 | ||
| + | |tss_score=1 | ||
| + | |uc001kfo.1= | ||
}} | }} | ||
Latest revision as of 18:29, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 88925655 |
|---|---|
| End of the center position in the TSS region: | 88925656 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -7028 |
|---|---|
| Nearest PromoterID: | NR_125373 |
| Entrez ID: | 100132116 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_125373 |
| Nearest Ensembl: | ENSG00000180139 |
| Gene Name: | ACTA2-AS1 |
| Gene Alias: | UC001kfo|ZXF1|uc001kfo.1 |
| Gene Description: | ACTA2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
