Difference between revisions of "TSS:Hg 106112.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=278 |entrez_id=3433 |gc_percent=0.41791 |gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 |...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GARG-39= | ||
| + | |IFI-54= | ||
| + | |IFI-54K= | ||
| + | |IFI54= | ||
| + | |IFIT-2= | ||
| + | |ISG-54 K= | ||
| + | |ISG-54K= | ||
| + | |ISG54= | ||
| + | |P54= | ||
| + | |all_trans=HGNC:5409 | ||
| + | |chr=chr10 | ||
| + | |cig42= | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=-175 |
| + | |distance_to_tss=181 | ||
| + | |end=89302233 | ||
| + | |end_of_center_position=89302228 | ||
|entrez_id=3433 | |entrez_id=3433 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=G10P2 | + | |gene_alias=G10P2{{!}}GARG-39{{!}}IFI-54{{!}}IFI-54K{{!}}IFI54{{!}}IFIT-2{{!}}ISG-54 K{{!}}ISG-54K{{!}}ISG54{{!}}P54{{!}}cig42 |
|gene_description=interferon induced protein with tetratricopeptide repeats 2 | |gene_description=interferon induced protein with tetratricopeptide repeats 2 | ||
| − | |gene_name=IFIT2 | + | |gene_id=3433 |
| + | |gene_name=interferon induced protein with tetratricopeptide repeats 2 | ||
| + | |gene_source=HGNC:5409 | ||
| + | |gene_symbol=IFIT2 | ||
| + | |gene_synonyms=GARG-39 IFI-54 ISG-54 ISG-54K cig42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5409 | ||
|nearest_ensembl=ENSG00000119922 | |nearest_ensembl=ENSG00000119922 | ||
|nearest_promoter_id=NM_001547 | |nearest_promoter_id=NM_001547 | ||
|nearest_refseq=NM_001547 | |nearest_refseq=NM_001547 | ||
|nearest_unigene=Hs.437609 | |nearest_unigene=Hs.437609 | ||
| + | |num_trans=3433 | ||
| + | |species=human | ||
| + | |start=89302221 | ||
| + | |start_of_center_position=89302227 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK300431 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106112.1 | |tss_id=hg_106112.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DTZ5 | ||
}} | }} | ||
Latest revision as of 19:45, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89302227 |
|---|---|
| End of the center position in the TSS region: | 89302228 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK300431 |
|---|---|
| Distance: | -175 |
| Num_trans: | 3433 |
| All_trans: | HGNC:5409 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_001547 |
| Entrez ID: | 3433 |
| Nearest Unigene: | Hs.437609 |
| Nearest Refseq: | NM_001547 |
| Nearest Ensembl: | ENSG00000119922 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Alias: | G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
