Difference between revisions of "TSS:Hg 106149.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-1929 |entrez_id=24138 |gc_percent=0.502488 |gene_alias=ISG58|P58|RI58 |gene_description=interferon induced protein with tetratr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P58= | ||
| + | |RI58= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=NA | ||
|distance_to_tss=-1929 | |distance_to_tss=-1929 | ||
| + | |end=89412653 | ||
| + | |end_of_center_position=89412640 | ||
|entrez_id=24138 | |entrez_id=24138 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=ISG58 | + | |gene_alias=ISG58{{!}}P58{{!}}RI58 |
|gene_description=interferon induced protein with tetratricopeptide repeats 5 | |gene_description=interferon induced protein with tetratricopeptide repeats 5 | ||
|gene_name=IFIT5 | |gene_name=IFIT5 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_012420 | |nearest_refseq=NM_012420 | ||
|nearest_unigene=Hs.252839 | |nearest_unigene=Hs.252839 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=89412625 | ||
| + | |start_of_center_position=89412639 | ||
| + | |strand=+ | ||
| + | |tata_box=-25(GCCTTTATGAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106149.1 | |tss_id=hg_106149.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89412639 |
|---|---|
| End of the center position in the TSS region: | 89412640 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -1929 |
|---|---|
| Nearest PromoterID: | NM_012420 |
| Entrez ID: | 24138 |
| Nearest Unigene: | Hs.252839 |
| Nearest Refseq: | NM_012420 |
| Nearest Ensembl: | ENSG00000152778 |
| Gene Name: | IFIT5 |
| Gene Alias: | ISG58|P58|RI58 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -25(GCCTTTATGAGC,-,0.00) |
