Difference between revisions of "TSS:Hg 106181.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=77588 |entrez_id=101926942 |gc_percent=0.482587 |gene_alias=- |gene_description=uncharacterized LOC101926942 |gene_name=LOC10192...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000425365.1:-499 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-499 | ||
|distance_to_tss=77588 | |distance_to_tss=77588 | ||
| + | |end=90463218 | ||
| + | |end_of_center_position=90463217 | ||
|entrez_id=101926942 | |entrez_id=101926942 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2653 |
| − | |gene_name= | + | |gene_name=LINC02653 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000236373 | |nearest_ensembl=ENSG00000236373 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_110657 | |nearest_refseq=NR_110657 | ||
|nearest_unigene=Hs.382666 | |nearest_unigene=Hs.382666 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=90463215 | ||
| + | |start_of_center_position=90463216 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000425365.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106181.1 | |tss_id=hg_106181.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:31, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 90463216 |
|---|---|
| End of the center position in the TSS region: | 90463217 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000425365.1 |
|---|---|
| Distance: | -499 |
| Num_trans: | 1 |
| All_trans: | ENST00000425365.1:-499 |
TATA-Box annotation
| Distance to TSS: | 77588 |
|---|---|
| Nearest PromoterID: | NR_110657 |
| Entrez ID: | 101926942 |
| Nearest Unigene: | Hs.382666 |
| Nearest Refseq: | NR_110657 |
| Nearest Ensembl: | ENSG00000236373 |
| Gene Name: | LINC02653 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2653 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
