Difference between revisions of "TSS:Hg 106274.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CYP26= | ||
| + | |P450RAI= | ||
| + | |P450RAI1= | ||
| + | |all_trans=HGNC:2603 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-1 | ||
| + | |end=93073898 | ||
| + | |end_of_center_position=93073892 | ||
|entrez_id=1592 | |entrez_id=1592 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=CP26 | + | |gene_alias=CP26{{!}}CYP26{{!}}P450RAI{{!}}P450RAI1 |
|gene_description=cytochrome P450 family 26 subfamily A member 1 | |gene_description=cytochrome P450 family 26 subfamily A member 1 | ||
| − | |gene_name=CYP26A1 | + | |gene_id=1592 |
| + | |gene_name=cytochrome P450 family 26 subfamily A member 1 | ||
| + | |gene_source=HGNC:2603 | ||
| + | |gene_symbol=CYP26A1 | ||
| + | |gene_synonyms=CP26 CYP26 P450RAI P450RAI1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2603 | ||
|nearest_ensembl=ENSG00000095596 | |nearest_ensembl=ENSG00000095596 | ||
|nearest_promoter_id=NM_000783 | |nearest_promoter_id=NM_000783 | ||
|nearest_refseq=NM_000783 | |nearest_refseq=NM_000783 | ||
|nearest_unigene=Hs.150595 | |nearest_unigene=Hs.150595 | ||
| − | |tata_box= | + | |num_trans=1592 |
| + | |species=human | ||
| + | |start=93073885 | ||
| + | |start_of_center_position=93073891 | ||
| + | |strand=+ | ||
| + | |tata_box=-33(GCCTATAAAGCG,+,0.00) | ||
| + | |transcript_name=ENST00000224356.5 AK075374 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106274.1 | |tss_id=hg_106274.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O43174 | ||
}} | }} | ||
Latest revision as of 19:49, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93073891 |
|---|---|
| End of the center position in the TSS region: | 93073892 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000224356.5 AK075374 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1592 |
| All_trans: | HGNC:2603 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_000783 |
| Entrez ID: | 1592 |
| Nearest Unigene: | Hs.150595 |
| Nearest Refseq: | NM_000783 |
| Nearest Ensembl: | ENSG00000095596 |
| Gene Name: | cytochrome P450 family 26 subfamily A member 1 |
| Gene Alias: | CP26|CYP26|P450RAI|P450RAI1 |
| Gene Description: | cytochrome P450 family 26 subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCCTATAAAGCG,+,0.00) |
