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Difference between revisions of "TSS:Hg 219688.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AB590228:0 DQ893309:3 EU176553:3 CU674022:4 BT007379:5 CR457046:5 ENST00000528296.5:9 ENST00000529920.5:-9 uc064rpx.1:9 uc064rqa.1:-9 BC007935:-9 BC030151:-9 ENST00000533397.5:-19 uc064rqb.1:-19 ENST00000531975.5:77 uc064rpu.1:77 ENST00000526668.5:175 uc064rpw.1:175 BC012197:-210 ENST00000528957.5:-217 uc064rpz.1:-217 BC000047:218 BC013104:-244 BC000077:-247 ENST00000532702.1:-250 uc064rqc.1:-250 ENST00000394920.6:-255 NM_033301:-255 NM_001317782:-255 NM_001317771:-255 uc003zeb.4:-255 ENST00000529163.5:-256 uc064rpv.1:-256 AK301073:-256 D28421:-256 AK289459:-262 ENST00000531767.1:-286 uc064rqd.1:-286 BC093064:-286 ENST00000525232.5:-287 uc033ccx.2:-287 AK309619:-287 ENST00000527914.5:-289 uc064rpy.1:-289 NM_000973:-312 ENST00000262584.7:-453 uc003zec.4:-453
+
|all_trans=HGNC:10368
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 18: Line 18:
 
|gene_type=ncRNA
 
|gene_type=ncRNA
 
|hgnc_mgi_id=HGNC:10368
 
|hgnc_mgi_id=HGNC:10368
|nearest_ensembl=ENSG00000161016
+
|nearest_ensembl=ENSG00000283764
 
|nearest_promoter_id=NR_106909
 
|nearest_promoter_id=NR_106909
 
|nearest_refseq=NR_106909
 
|nearest_refseq=NR_106909
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=47
+
|num_trans=6132
 
|species=human
 
|species=human
 
|start=144792133
 
|start=144792133

Latest revision as of 07:20, 21 July 2021

Basic information about the TSS


TSS ID:hg_219688.1
Species:human
Chr:chr8
TSS Classification:yes
Start:144792133
End:144792134
Strand:-
TSS Score:1
Start of the center position in the TSS region:144792133
End of the center position in the TSS region:144792134



Gene and protein annotation


Transcript_name:AB590228
Distance:0
GeneID:6132
HGNC/MGI_ID:HGNC:10368
UniProt_ID:
Gene_name:ribosomal protein L8
Gene_symbol:RPL8
Gene_synonyms:L8
Gene_source:HGNC:10368



Transcript annotation


Transcript_name:AB590228
Distance:0
Num_trans:6132
All_trans:HGNC:10368



TATA-Box annotation


Distance to TSS:-143
Nearest PromoterID:NR_106909
Entrez ID:102465978
Nearest Unigene:
Nearest Refseq:NR_106909
Nearest Ensembl:ENSG00000283764
Gene Name:ribosomal protein L8
Gene Alias:hsa-mir-6850
Gene Description:microRNA 6850
Gene Type:ncRNA
CpG%:0.16
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):