Difference between revisions of "TSS:Hg 106295.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ADPAEF= | ||
| + | |ADPEAF= | ||
| + | |EPITEMPIN= | ||
| + | |EPT= | ||
| + | |ETL1= | ||
| + | |IB1099= | ||
| + | |all_trans=HGNC:6572 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-60 | ||
| + | |end=93757893 | ||
| + | |end_of_center_position=93757877 | ||
|entrez_id=9211 | |entrez_id=9211 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=ADLTE | + | |gene_alias=ADLTE{{!}}ADPAEF{{!}}ADPEAF{{!}}EPITEMPIN{{!}}EPT{{!}}ETL1{{!}}IB1099 |
|gene_description=leucine rich glioma inactivated 1 | |gene_description=leucine rich glioma inactivated 1 | ||
| − | |gene_name=LGI1 | + | |gene_id=9211 |
| + | |gene_name=leucine rich glioma inactivated 1 | ||
| + | |gene_source=HGNC:6572 | ||
| + | |gene_symbol=LGI1 | ||
| + | |gene_synonyms=EPITEMPIN ETL1 IB1099 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6572 | ||
|nearest_ensembl=ENSG00000108231 | |nearest_ensembl=ENSG00000108231 | ||
|nearest_promoter_id=NM_005097 | |nearest_promoter_id=NM_005097 | ||
|nearest_refseq=NM_005097 | |nearest_refseq=NM_005097 | ||
|nearest_unigene=Hs.533670 | |nearest_unigene=Hs.533670 | ||
| + | |num_trans=9211 | ||
| + | |species=human | ||
| + | |start=93757859 | ||
| + | |start_of_center_position=93757876 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000630487.2 BC022500 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106295.1 | |tss_id=hg_106295.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A0D9SFS5 | ||
}} | }} | ||
Latest revision as of 19:50, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93757876 |
|---|---|
| End of the center position in the TSS region: | 93757877 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000630487.2 BC022500 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9211 |
| All_trans: | HGNC:6572 |
TATA-Box annotation
| Distance to TSS: | -60 |
|---|---|
| Nearest PromoterID: | NM_005097 |
| Entrez ID: | 9211 |
| Nearest Unigene: | Hs.533670 |
| Nearest Refseq: | NM_005097 |
| Nearest Ensembl: | ENSG00000108231 |
| Gene Name: | leucine rich glioma inactivated 1 |
| Gene Alias: | ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 |
| Gene Description: | leucine rich glioma inactivated 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
